Trent University Graduate Thesis Collection

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    Copyright for all items in the Trent University Graduate Thesis Collection is held by the author, with all rights reserved, unless otherwise noted.
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    Using the Social Amoeba Dictyostelium discoideum as a Model to Study CLN5 Disease

    Year: 2026, 2026
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Kim, William David, Thesis advisor (ths): Huber, Robert J, Degree committee member (dgc): Donaldson, Michael, Degree committee member (dgc): Shafer, Aaron, Degree committee member (dgc): Saville, Barry, Degree granting institution (dgg): Trent University
    Abstract: <p>The neuronal ceroid lipofuscinoses (NCLs), collectively referred to as Batten disease, are a group of neurodegenerative diseases that affect all ages, primarily children. Batten disease is caused by mutations in 1 of the 13 ceroid lipofuscinosis neuronal (CLN) genes (CLN1-CLN8, CLN10-CLN14), each of which causes an NCL subtype when mutated. One of the NCL subtypes, CLN5 disease, is… more

    Genetic, Genomic and Diet Diversity: Insight into the Persistence and Vulnerability of Muskoxen (Ovibos moschatus)

    Year: 2025, 2025
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Prewer, Erin, Thesis advisor (ths): Kyle, Christopher J, Degree committee member (dgc): Donaldson, Michael, Degree committee member (dgc): Shafer, Aaron, Degree committee member (dgc): Saville, Barry, Degree granting institution (dgg): Trent University
    Abstract: <p>Molecular and genomic tools provide a deeper understanding of the ecology and evolution of species and their capacity to adapt to changing selective pressures, where diversity is presumedly linked to higher fitness and evolutionary potential. Molecular tools can also illustrate how historical processes affect contemporary genetic variation to predict how current population trends may… more

    Host Population Immunogenetics in a Changing World: Signatures of Selection in the Context of Endemic and Invasive Diseases in Wildlife

    Year: 2025, 2025
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Baecklund, Tristan Mackenzie, Thesis advisor (ths): Kyle, Christopher J, Degree committee member (dgc): Donaldson, Michael, Degree committee member (dgc): Shafer, Aaron, Degree committee member (dgc): Brown, Glen, Degree granting institution (dgg): Trent University
    Abstract: <p>Heterogeneous environments impose discordant selective pressures on natural populations, where disparate biotic/abiotic factors and variable population connectivity, yield mosaic patterns of genetic variation on the landscape. The ability to maintain or change genetic mosaics of populations becomes key to persistence, as species increasingly need to adapt to rapidly changing… more

    Genomic Signatures of Speciation in Sympatric Flying Squirrels

    Year: 2024, 2024
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Menelon, Laurelie, Thesis advisor (ths): Bowman, Jeff, Thesis advisor (ths): Wilson, Paul, Degree committee member (dgc): Shafer, Aaron, Degree granting institution (dgg): Trent University
    Abstract: <p>Hybridization contributes to the genetic diversity and can impact speciation. This study investigates the genetic evidence of recent hybridization under climate change in sympatric populations of northern and southern flying squirrels in Ontario. Using low-coverage whole-genome sequences, my research examines the existing population structure and measures the genomic variation of the… more
    Full Text: 1 2 3 GENOMIC SIGNATURES OF SPECIATION IN SYMPATRIC FLYING SQUIRRELS 4 5 6 7 8 9 A Thesis Submitted to the Committee on Graduate Studies in Partial Fulfillment of the Requirements for the Degree of Master of Science in the Faculty of Arts and Science 10 …

    Genomic Signatures of Speciation in Sympatric Flying Squirrels

    Year: 2024, 2024
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Menelon, Laurelie, Thesis advisor (ths): Bowman, Jeff, Thesis advisor (ths): Wilson, Paul, Degree committee member (dgc): Shafer, Aaron, Degree granting institution (dgg): Trent University
    Abstract: <p>Hybridization contributes to the genetic diversity and can impact speciation. This study investigates the genetic evidence of recent hybridization under climate change in sympatric populations of northern and southern flying squirrels in Ontario. Using low-coverage whole-genome sequences, my research examines the existing population structure and measures the genomic variation of the… more

    Social Structure and Behaviour of the Eastern Wild Turkey

    Year: 2024, 2024
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Baici, Jennifer, Thesis advisor (ths): Bowman, Jeff, Degree committee member (dgc): Patterson, Brent, Degree committee member (dgc): Shafer, Aaron, Degree granting institution (dgg): Trent University
    Abstract: <p>Wildlife translocation programs are widely employed as a strategy to reintroduce extirpated species into regions they once inhabited but no longer do. Reintroduction programs can be successful at re-establishing extirpated populations and also provide unique opportunities to study post-reintroduction population dynamics and behavioural ecology. The wild turkey (Meleagris gallopavo) is a… more

    The effects of heat dissipation capacity on avian physiology and behaviour

    Year: 2021, 2021
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Tapper, Simon, Thesis advisor (ths): Burness, Gary, Thesis advisor (ths): Nocera, Joseph J, Degree committee member (dgc): Shafer, Aaron, Degree granting institution (dgg): Trent University
    Abstract: <p>In endotherms, physiological functioning is optimized within a narrow range of tissue temperatures, meaning that the capacity to dissipate body heat is an important parameter for thermoregulation and organismal performance. Yet, experimental research has found mixed support for the importance of heat dissipation capacity as a constraint on reproductive performance. To investigate the… more
    Full Text: The effects of heat dissipation capacity on avian physiology and behaviour A Thesis Submitted to the Committee on Graduate Studies in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in the Faculty of Arts and Science TRENT …

    Daphnia pulicaria responses to temperature and nutrients stress: what happens when the heat is on?

    Year: 2020, 2020
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Starke, Cody, Thesis advisor (ths): Frost, Paul C, Degree committee member (dgc): Shafer, Aaron, Degree committee member (dgc): Paterson, Michael, Degree granting institution (dgg): Trent University
    Abstract: <p>Warming climates have had various consequences on terrestrial and aquatic food webs that are expected to persist. There is evidence suggesting that certain organisms are better equipped to handle changing climates compared to others. Therefore, the purpose of my thesis was to study the adaptability of Daphnia under temperature stress and nutrient limitation. First, to examine the effects… more
    Full Text: DAPHNIA PULICARIA RESPONSES TO TEMPERATURE AND NUTRIENTS STRESS: WHAT HAPPENS WHEN THE HEAT IS ON? A Thesis Submitted to the Committee on Graduate Studies in Partial Fulfillment of the Requirements for the Degree of Master of Science in the Faculty of …

    Using environmental DNA (eDNA) metabarcoding to assess aquatic plant communities

    Year: 2018, 2018
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Coghlan, Stephanie, Thesis advisor (ths): Freeland, Joanna, Thesis advisor (ths): Shafer, Aaron, Degree committee member (dgc): McConnell, Sabine, Degree granting institution (dgg): Trent University
    Abstract: <p>Environmental DNA (eDNA) metabarcoding targets sequences with interspecific</p><p>variation that can be amplified using universal primers allowing simultaneous detection</p><p>of multiple species from environmental samples. I developed novel primers for three</p><p>barcodes commonly used to identify plant species, and compared amplification success… more
    Full Text: Using environmental DNA (eDNA) metabarcoding to assess aquatic plant communities A Thesis Submitted to the Committee on Graduate Studies in Partial Fulfillment of the Requirements for the Degree of Master of Science in the Faculty of Arts and Science …

    Complex niche determinants in terrestrial salamanders: Does hybridism or reproductive parasitism explain large-scale patterns of distribution?

    Year: 2018, 2018
    Member of: Trent University Graduate Thesis Collection
    Name(s): Creator (cre): Mills, Peter, Thesis advisor (ths): Murray, Dennis, Degree committee member (dgc): Davy, Christina, Degree committee member (dgc): Shafer, Aaron, Degree granting institution (dgg): Trent University
    Abstract: <p>I assessed how organisms having multiple biotic attributes may have conflicting niche determinants, and whether the realized niche reflects single or multiple attributes. All-female salamanders engage in two biotic states: hybridism and reproductive parasitism. Hybrids should occupy areas transitional to those used by parental species, whereas parasites that engage in competition with… more
    Full Text: Complex niche determinants in terrestrial salamanders: Does hybridism or reproductive parasitism explain large-scale patterns of distribution? A thesis submitted to the Committee on Graduate Studies in Partial Fulfillment of the Requirement for the Degree …